New Internal Transcribed Spacer (ITS) DNA sequences were generated for most violet (Viola) species in Japan and eastern Asia. Parsimony and maximum likelihood analyses of these and sequences for other infrageneric groups worldwide (75 ingroup species total) permitted us to address taxonomic problems in Asian species, reevaluate group assignments, clarify phylogenetic relationships and circumscription of groups, and make biogeographic inferences. Most taxa often considered conspecific varieties (V. iwagawai/V. tashiroi and V. chaerophyllum/V. eizanensis) or conspecific populations (Beringian and Japanese V. langsdorffii) encompassed as much ITS divergence as other accepted species pairs in their respective subclades, encouraging future studies of these complexes. Extensive deletions in the sequence of V. stoloniflora of the Australasiaticae probably contributed to its peculiar isolation in most analyses; however, its extant sequence shared numerous synapomorphies with the Adnatae and Stolonosae. Membership of V. raddeana in the Bilobatae was confirmed, and V. okinawaensis and V. utchinensis were segregated from other Australasiaticae and inserted among the Rostratae in another clade. Three species of Nudicaules of sect. Chamaemelanium were removed to an isolated subclade consisting of sect. Dischidium--a group sometimes subsumed in sect. Chamaemelanium. Inclusion of numerous Asian Viola species maintained the paraphyletic grade of intermingling Chamaemelanium and Plagiostigma groups suggested by other recent studies but increased irresolution among them and strengthened the case for drastic recircumscription of many groups in the assemblage. The remaining species fell out according to previous group assignments in the Rostratae-Plagiostigma-Nosphinium clade, and Japanese V. langsdorffii was placed basal to Beringian V. langsdorffii + Hawaiian sect. Nosphinium. The expanded data set amplified biogeographic inferences for Viola worldwide from earlier investigations using few Asian representatives, and prompted new hypotheses of diversification and dispersal in certain eastern Asian violet groups.

Key words: biogeography, Internal Transcribed Spacer, Japan, phylogenetic relationships, Viola