Physical maps of ribosomal RNA genes (rDNA) have been generated by fluorescent in situ hybridization for seven diploid (2n = 10) Paeonia species: P. delavayi and P. rockii of section Moutan, P. brownii and P. californica of section Oneapia, and P. emodi, P. tenuifolia, and P. veitchii of section Paeonia. For species in sections Moutan and Paeonia, all of the rDNA loci are located near telomeres on the short arms of the chromosomes. For the two species in section Oneapia, rDNA sites were found on both arms of certain chromosomes. This result supports previous observations, based on meiotic configurations, that chromosomal structural rearrangement occurred frequently in P. brownii and P. californica. The number of rDNA loci varies within each section. Paeonia rockii, P. californica, and P. tenuifolia have three rDNA loci. Paeonia delavayi and P. brownii have four loci. Strikingly, P. emodi and P. veitchii have a rDNA site on each of the ten mitotic chromosomes. The most parsimonious interpretation of evolution of the number of rDNA loci in Paeonia is that the most recent common ancestor of extant peony species had three rDNA loci located on chromosomes 3, 4 and 5. The additional loci were gained independently in each of the three sections. The increase of the number of rDNA loci is likely to result from translocation of rDNA repeats from chromosomes bearing rDNA loci to chromosomes without rDNA loci. The translocation may have been facilitated by telomeric location of rDNA loci. For allotetraploid peony species lacking polymorphism in sequences of the internal transcribed spacers of rDNA, the polymorphism that originated from hybridization between divergent diploid parental species may have been homogenized through concerted evolution among at least six rDNA loci.

Key words: concerted evolution, in situ hybridization, Paeonia, physical map, rDNA