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Dr. Darrin R. Akins |
Assistant Professor, Department of Microbiology and Immunology, University of Oklahoma Health Sciences Center (Ph.D., University of Texas Southwestern Medical School, Dallas, TX, 1995). Functional genomics and proteomics of pathogenic microorganisms, with a focus on the spirochete that causes Lyme disease and the potential bioterror agent Francisella tularensis; e-mail: darrin-akins@ouhsc.edu. His research employs state-of-the-art methodologies for identifying and characterizing genes and proteins that are important in causing human disease. He is interested in using global gene profile analyses to identify subsets of genes that cause disease during the infectious process. The long-term objective of his research is to generate new vaccines and disease modulating therapeutics for microbial diseases. http://w3.ouhsc.edu/mi/faculty/akins.html |
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Dr. Ira J. Blader |
Assistant Professor, Department of Microbiology and Immunology, University of Oklahoma Health Sciences Center (Ph.D., University of Alabama at Birmingham at Alabama, 1999). Functional genomic analysis of the interaction between the Apicomplexan parasite Toxoplasma gondii and its host. Email: iblader@ouhsc.edu. His research utilizes DNA microarrays to identify host genes and pathways that are differentially regulated during infection. There are two primary objectives of this research. First, he is identifying the parasite molecules necessary to modulate host gene expression and their role in pathogenesis. Second, he is determining which of the modulated host genes and pathways are necessary to protect the host from infection ("pro-host") and those that are required by the parasite for its growth ("pro-parasite"). He is also interested in developing and applying algorithms to microarray data in order to identify regulatory transcriptional elements commonly regulated during infection. |
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Dr. Richard E. Broughton |
Assistant Professor, Department of Zoology, Research Biologist, Oklahoma
Biological Survey (Ph.D., Arizona State, 1995), Molecular phylogenetics,
population genetics and comparative genomics of fishes; e-mail: rbroughton@ou.edu.
His research employs molecular methods to examine historical patterns
of diversification among natural groups of animals. He is interested in
how DNA evolves in different genes and genomes, as well as the application
of molecular data to fundamental questions in systematics, speciation,
population divergence, biogeography, and conservation. A major focus is
developing computational methods for extracting accurate historical signal
from DNA sequence data. |
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Dr. Michael Centola |
Assistant Member and Director of the Microarray Research Facility, Department
of Arthritis and Immunology, Oklahoma Medical Research Foundation (Ph.D.,
University of California, Santa Barbara, 1994), Molecular, cellular, and
genomics studies of human autoinflammatory disease; e-mail: centolam@omrf.ouhsc.edu.
He investigates the molecular mechanisms mediating human autoimmune and
autoinflammatory disease. In collaboration with academic and industrial
partners he performs gene expression profiles using microarrays to define
new effector and regulatory genes, physiologic systems of dysfunction,
as well as novel molecular-based classification schemes of human autoimmune
and autoinflammatory disease. |
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Dr. Qi Cheng |
Assistant Professor in Computer Science Department, University of Oklahoma
(PhD, University of Southern California, 2001); e-mail: qcheng@ou.edu.
He is interested in understanding the algorithmic properties of DNA/molecular
self-assembly and studying the theoretical foundations of building more
powerful and energy efficient computing devices using DNA/molecular self-assembly.
He also works in the fields of algorithms, cryptography and computational
complexity. |
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Dr. Tyrrell Conway |
Associate Professor, Department of Botany and Microbiology, Co-Director
Advanced Center for Genome Technology, Director OU Microarray Core Facility,
e-mail: tconway@ou.edu. (Ph.D., Oklahoma
State University, 1984). Microbial physiology, ecology, pathogenesis,
and genetics. His research employs DNA microarrays. He is interested in
the genetic programs employed by enteric bacteria for colonization and
pathogenesis in the mouse model. |
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Dr. Dirk Dittmer |
Assistant Professor, Department of Mircobiology and Immunonology, Assistant
Professor, OUHSC (Ph.D., Princeton University, 1994), herpesvirus pathogenesis,
discovery of new viruses, gene expression arrays; e-mail: dirk-dittmer@ouhsc.edu.
His research employs molecular methods to examine viral transcription
in AIDS related tumors. He is interested to find new human pathogens as
well as to uncover basic mechanisms of viral tumorigenesis. http://w3.ouhsc.edu/mi/faculty/dittmer.html |
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Dr. David S. Durica |
Associate Professor, Department of Zoology (Ph.D., Connecticut, 1977),
Developmental genetics and comparative genomics, e-mail: ddurica@ou.edu.
This laboratory is using molecular cloning to examine the genomic architecture,
developmental expression, physical properties and molecular evolution
of members of the nuclear receptor multigene family. A particular interest
is the role of ecdysteroid and retinoid signaling in the control of crustacean
limb regeneration, and the co-ordinate regulation of regeneration relative
to regular cycles of crustacean growth and reproduction. |
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Dr. David W. Dyer |
Professor, Department of Microbiology and Immunology, OUHSC (Ph.D., Kansas
State University, 1983), microbial pathogenesis and genomics; email: david-dyer@ouhsc.edu.
His research has focused the ability of pathogenic bacteria to obtain
iron during growth in the human host; these studies are currently focusing
on Neisseria meningitidis, a common cause of meningitis in infants and
young children. A second research focus on microbial genomics and comparative
genomics began in 1995, with the genome sequencing of Neisseria gonorrhoeae,
the causative agent of the human sexually transmitted disease gonorrhea.
He has recently completed the genome sequences of nontypeable Haemophilus
influenzae (causing otitis media) and Actinobacillus actinomycetemcomitans
(periodontal disease), and is currently sequencing the genomes of Haemophilus
somnus and Actinobacillus leuropneumoniae (veterinary pathogens). |
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Dr. Michael S. Gilmore |
Vice President for Research, George Lynn Cross Research Professor, Departments of Ophthalmology and Microbiology, The University of Oklahoma Health Sciences Center (Ph.D. University of Oklahoma Health Sciences Center, 1982). Antibiotic development, bacterial pathogenesis, comparative gram positive bacterial genomics, gene expression in biofilms, new therapies for infectious diseases at all sites, including the eye. This research uses molecular and cellular methods for defining critical interactions between host and parasite that may be targeted by new therapeutics. Human pathogens under study include Enterococcus, Staphylococcus, Streptococcus gordonii, and Bacillus cereus. E-mail address: michael-gilmore@ouhsc.edu. http://w3.ouhsc.edu/MPEIR/gilmore.html |
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Dr. Le Gruenwald |
Professor, School of Computer Science, The University of Oklahoma (Ph.D., Southern Methodist University, 1990), Database Management and Data Mining; email: ggruenwald@ou.edu. Her research studies database techniques to model, store, and retrieve complex biological data as well as data mining techniques to analyze gene expression data. Her recent project involves the development of a new data clustering technique called Multilayer Adjusted Tree Organizing Map (MATOM) for Escherichia coli Gene Expression Data Analysis. http://www.cs.ou.edu/~database/faculty.htm |
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Dr. Yuriy Gusev |
Assistant Professor in Bioinformatics, Department of Surgery, is instrumental
in the ongoing development and activities of surgical research facility
focused on molecular and cellular studies of human diseases related to
Surgery; e-mail: Yuriy-Gusev@ouhsc.edu.
He is responsible for management of computerized cell imaging and bioinformatics
systems for gene expression micro-arrays technologies in Surgical Research
Core Facilities as well as education of residents, postdoctoral fellows
and medical and graduate students. Specific areas of research interest:
Computational Cell Biology: modeling and simulation of molecular mechanisms
of cell division and cell proliferation in normal and cancer cells; Functional
Genomics: bioinformatics methods for differential gene expression analysis
and proteomics; Cell Image Analysis: quantitative methods for analysis
of specific molecular markers in individual cancer cells. Cancer Research:
mechanisms of genetic instability of cancer cells. |
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Dr. Randall S. Hewes |
Assistant Professor, Department of Zoology (Ph.D., University of Washington,
1993), cellular biology and molecular genetics; e-mail: hewes@ou.edu.
His research aim is to understand mechanisms underlying the long-term
regulation of neuropeptide signaling. Neuropeptides perform diverse and
critical functions in animal homeostasis and development. In humans, long-term
changes in neuropeptide secretion are intimately associated with common
diseases, such as diabetes and obesity. Through genetic studies in the
fruit fly (Drosophila melanogaster) and the mouse, he is identifying molecular
mechanisms with potential roles in these long-term changes. In future
research, his approaches will include genome scale mutagenesis coupled
with DNA-sequence based detection of single nucleotide polymorphisms and
transcriptional profiling. |
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Dr. John J. Iandolo |
Professor and Chairman, Department of Microbiology and Immunology, Oklahoma
University Health Sciences Center, Oklahoma City (Ph.D., University of
Illinois, 1965). Molecular biology of Staphylococcus aureus and its bacteriophages,
e-mail: john-iandolo@ouhsc.edu.
Research focuses on gene regulation how it is influenced by bacteriophage
carriage. His laboratory (in collaboration with Bruce Roe) sequenced the
genome of strain 8325, the species type-strain. He is also interested
in the expression, regulation development of BacR1, a peptide antibiotic
produced by S. aureus that has a broad spectrum of activity. |
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Dr. Thomas S. Ray |
Professor, Department of Zoology, (Ph.D., Harvard, 1981), Neuropharmacology,
Bioinformatics, and Evolution; e-mail: tray@ou.edu.
He is currently pursuing two research directions: 1) Bioinformatic studies
of the evolution of gene families. 2) Understanding the chemical architecture
of the human brain/mind through pharmacology. |
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Dr. Bruce A. Roe |
George Lynn Cross Research Professor of Chemistry and Biochemistry, (Ph.
D., Western Michingan University, 1970), Genomic structure and function;
Procaryote and eukaryote genomic DNA sequence analysis and gene expression;
e-mail: broe@ou.edu. His laboratory presently
is one of the NIH designated Genome Centers involved in the Human Genome
Project, whose goal is to determine the complete sequence of the 3 Billion
base paired human chromosomes by 2005. During the past decade he has played
a major role in developing many of the techniques needed to complete this
goal, as well as trained many of the MS and PhD scientists actively involved
in this project worldwide, and implementing new robotics and computer
based analysis methods. He also is sequencing several bacterial genomes
and actively discovering the new and unique genes in both humans and bacteria.
These studies have and will continue to provide an in-depth genetic based
understanding of normal gene function and the alterations that occur in
a myriad of genetic-based diseases. |
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Dr. Dee H. Wu |
Associate Professor and Section Chief of Technology Application Development
and Translational Research in Radiological Sciences, with adjunct appointments
in neuroscience and radiation oncology. He received a Ph.D. in biomedical
engineering from Case Western Reserve University and has 11 granted patents
and over 20 publications/book chapters in both industrial and academic
settings. The research activities in his lab may be summarized into 3
groups: 1) development of methods to increase the clinical efficiency
of the medical facilities and the exchange of information; 2) identification,
characterization and validation of imaging biomarkers; and 3) improvement
to instrumentation and the corresponding physical understanding of underlying
phenomenology in the progression of disease. Dr. Wu works closely with
several bioinformatics groups at OUHSC Oklahoma City and OU Norman campuses.
His section correlates anatomical, physiological, cellular, and molecular
processes associated with the presence and severity of disease. This information
is used to improve efficiency of imaging instrumentation and to develop
databases and workflow structures to promote biomedical informatics standardization.
Email: dee-wu@ouhsc.edu |
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