2020 Jacobson DK, Honap TP, Monroe C, Lund J, Houk BA, Novotny AC, Robin C, Marini E, Lewis Jr CM. Functional diversity of microbial ecologies estimated from ancient human coprolites and dental calculus. Phil. Trans. R. Soc. B 375: 20190586.
2020 Stone AC, Lewis Jr CM Schuenemann VJ Insights into health and disease from ancient biomolecules. Phil. Trans. R. Soc. B 375: 20190568.
2020 Honap TP, Sankaranarayanan K, Schnorr ST, Ozga A, Warinner C, Lewis Jr. CM. Biogeographic study of human gut associated CrAssphage suggests impacts from industrialization. PLoS One. 2020 Jan 15;15(1):e0226930. doi: 10.1371/journal.pone.0226930. eCollection 2020
2019 Hagan RW, Hofman CA, Hübner A, Reinhard K, Schnorr S, Lewis Jr CM, Sankaranarayanan K, Warinner C. Comparison of extraction methods for recovering ancient microbial DNA from paleofeces. 30 November 2019 https://doi.org/10.1002/ajpa.23978
2019 Lewis Jr. CM, McCall LI, Sharp R, Spicer P. Ethical Priority of the Most Actionable System of Biomolecules - the Metabolome. American Journal of Physical Anthropology. Feb;171(2):177-181. doi: 10.1002/ajpa.23943. Epub 2019 Oct 23.
2019 Patel NB, Obregón-Tito AJ, Tito RY, Trujillo-Villaroel O, Marin-Reyes L, Troncoso-Corzo L, Guija-Poma E, Lewis Jr. CM, Lawson PA. Citroniellla saccharovorans gen. nov., sp. nov. isolated from feces from a hunter-gatherer community in Peru. Int J Syst Evol Microbiol. 69(4):1142-1148. doi: 10.1099/ijsem.0.003287
2019 Schnorr SL, Hofman C, Shandukani R, Duncan FD, Honap TA, Lesnik J, Lewis Jr. CM Taxonomic features and comparisons of the gut microbiome from two edible fungus-farming termites (Macrotermes falciger; M. natalensis) harvested in the Vhembe district of Limpopo, South Africa. BMC Microbiology. 17;19(1):164. doi: 10.1186/s12866-019-1540-5.
2018 Ziesemer KA, Ramos-Madrigal J, Mann AE, Brandt B, Sankaranarayanan K, Ozga A, Hoogland M, Hofman C, Salazar-Garcia D, Frohlich B, Milner G, Stone AC, Aldenderfer M, Lewis Jr. CM, Hofman CL, Warinner C, Schroeder H. The efficacy of whole human genome and high-throughput sequencing on ancient dental calculus. AJPA. 2018, online. doi: 10.1002/ajpa.23763
2018 Mann AE, Sabin S, Ziesemer K, Vagene AJ, Schroeder H, Ozga AT, Sankaranarayanan K, Hofman CA, Fellows Yates JA, Salazar-Garcia DC, Frohlich B, Aldenderfer M, Hoogland M, Read C, Milner GR, Stone AC, Lewis CM, Jr., Krause J, Hofman C, Bos KI, Warinner C. Differential preservation of endogenous human and microbial DNA in dental calculus and dentin. Sci Rep. 2018,8(1):9822. doi: 10.1038/s41598-018-28091-9.2018
2018 McDonald D, Hyde E, Debelius JW, Morton JT, Gonzalez A, Ackermann G, Aksenov AA, Behsaz B, Brennan C, Chen Y, DeRight Goldasich L, Dorrestein PC, Dunn RR, Fahimipour AK, Gaffney J, Gilbert JA, Gogul G, Green JL, Hugenholtz P, Humphrey G, Huttenhower C, Jackson MA, Janssen S, Jeste DV, Jiang L, Kelley ST, Knights D, Kosciolek T, Ladau J, Leach J, Marotz C, Meleshko D, Melnik AV, Metcalf JL, Mohimani H, Montassier E, Navas-Molina J, Nguyen TT, Peddada S, Pevzner P, Pollard KS, Rahnavard G, Robbins-Pianka A, Sangwan N, Shorenstein J, Smarr L, Song SJ, Spector T, Swafford AD, Thackray VG, Thompson LR, Tripathi A, Vazquez-Baeza Y, Vrbanac A, Wischmeyer P, Wolfe E, Zhu Q, American Gut C, Knight R. American Gut: an Open Platform for Citizen Science Microbiome Research. mSystems. 2018,3(3). doi: 10.1128/mSystems.00031-18.